SNP Profiles of PA 289 [PER]   View Data

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 Key

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_Input profile
GGATCCGGCTACCCAACCAAGGAAAACC
1._RUQ_952
__ACGTCTAACCGGCCAA_AAAACT
2._RUQ_952
__AC____GG____AA_
3._RUQ_952
GGATACACAGAAGGGGGGAAGG_AA_
 1516171819202122232425262728
_Input profile
GTGGCCTTAATTGGCCCCTTCGAATTAA
1._RUQ_952
GGCGCCTT__GGCCCC____AG
2._RUQ_952
_CGCC_AATTGG______AG
3._RUQ_952
CCCGCCAA_CCCC_GGAGCCAAAGAG
 29303132333435363738394041 
_Input profile
CCGGAACCCCTTTTCCTTCTGGGGCCX_X
1._RUQ_952
CC____TT___CTGGGG_X_X
2._RUQ_952
_GG_CC_TT____GG__X_X
3._RUQ_952
GGGGAA__AAGGCCAAAGCCGGGGX_X

Input profile: PA_289_[PER]

 
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: MARPER C 803
 Dapeng Zhang, 2014

1._PA_289_[PER] RUQ_952

81.3 %
24 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

2._PA_289_[PER] RUQ_952

80.8 %
13 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

3._PA_289_[PER] RUQ_952

38.6 %
35 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP193 7TcSNP226 8TcSNP230 9TcSNP242 10TcSNP372
11TcSNP429 12TcSNP469 13TcSNP529 14TcSNP534 15TcSNP560
16TcSNP577 17TcSNP591 18TcSNP619 19TcSNP645 20TcSNP836
21TcSNP872 22TcSNP878 23TcSNP891 24TcSNP917 25TcSNP929
26TcSNP953 27TcSNP994 28TcSNP998 29TcSNP1060 30TcSNP1062
31TcSNP1075 32TcSNP1144 33TcSNP1165 34TcSNP1253 35TcSNP1270
36TcSNP1350 37TcSNP1414 38TcSNP1442 39TcSNP1458 40TcSNP1484
41TcSNP1520